SubtiBank SubtiBank
fadG [2019-06-18 08:54:10]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

fadG [2019-06-18 08:54:10]

fatty acid degradation
locus
BSU14071
pI
8.56
mw
64.00 kDa
protein length
576 aa Sequence Blast
gene length
1731 bp Sequence Blast
function
fatty acid degradation
product
unknown
essential
no
synonyms
ykuG

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.4|Lipid metabolism] → [category|SW 2.4.1|Utilization of lipids] → [category|SW 2.4.1.3|Utilization of fatty acids]
  • Gene

    Coordinates
    1,479,137 1,480,867

    The protein

    Protein family

  • fadG family (according to Swiss-Prot)
  • Paralogous protein(s)

  • [protein|5D159F09BFD98B58A7EDAD37A4DB6468A702D09A|YbfG]
  • Expression and Regulation

    Operons

    genes
    [gene|CE990D33A12C50D22506A52E0099F7D97A762D4E|fadH]-[gene|0264C72F95D53F0211B52753DA37B4A8C0E982D2|fadG]-[gene|B46D407B116E358DFB6284466DE5926EB3719C53|ykzU]
    description
    [Pubmed|17189250]

    regulatory mechanism

  • [protein|8A8F93BAD0582F712C9EE1C3FE6C04292E91F390|FadR]: repression, [Pubmed|17189250], in [regulon|8A8F93BAD0582F712C9EE1C3FE6C04292E91F390|FadR regulon]
  • regulation

  • induced in the presence of long-chain fatty acids ([protein|8A8F93BAD0582F712C9EE1C3FE6C04292E91F390|FadR]) [Pubmed|17189250]
  • expression of the operon is strongly induced during [SW|biofilm formation] [pubmed|31113899]
  • view in new tab

    Biological materials

    Mutant

  • MGNA-A768 (ykuG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/768 NBRP B. subtilis, Japan]
  • BKE14071 ([gene|0264C72F95D53F0211B52753DA37B4A8C0E982D2|fadG]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14071 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATATTACCTTCCTCCC, downstream forward: _UP4_TAGGGGAAGACCTAGTAAAT
  • BKK14071 ([gene|0264C72F95D53F0211B52753DA37B4A8C0E982D2|fadG]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14071 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATATTACCTTCCTCCC, downstream forward: _UP4_TAGGGGAAGACCTAGTAAAT
  • References

  • 17189250,17189250,17189250